It appears that in msfconsole some of the modules appear twice.
Affected on a kali 4.9.0-kali3-amd64
Have the community edition installed over the top of the built in kali one, was thinking this was the cause ?
If you try run apt-get remove metasploit-framework however you loss a load of other programs.
(Not tried to find a work around yet)
When running msfconsole it appears to be the msf community edition version rather than the built in one.
I've checked and there are no dupes in the metasploit community modules.
Any ideas ?